BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032F01LP1|AL429591
(880 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig386 1375 0.0
>3x_Contig386
Length = 1502
Score = 1375 bits (692), Expect = 0.0
Identities = 705/711 (99%)
Strand = Plus / Minus
Query: 1 aatcagtnacgttgtattcaacatcacctgcataatgctttagtataaagcagttatcca 60
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 aatcagtaacgttgtattcaacatcacctgcataatgctttagtataaagcagttatcca 660
Query: 61 gcttagaccttttgaatttagtggatttattatcccaagatgaaagttatttcgaataaa 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 659 gcttagaccttttgaatttagtggatttattatcccaagatgaaagtaatttcgaataaa 600
Query: 121 aagaggcatctgaagattttggtaagatcgattcttcttctaaaatcggtagtatacctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 aagaggcatctgaagattttggtaagatcgattcttcttctaaaatcggtagtatacctg 540
Query: 181 gaatgctgctgtttttctgttcaattaaatcaattgtggtttgtaagtctttgccataat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 gaatgctgctgtttttctgttcaattaaatcaattgtggtttgtaagtctttgccataat 480
Query: 241 cgatgaaattccattggatgtcttccttttgatattcattttgttccaatacaaacatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 cgatgaaattccattggatgtcttccttttgatattcattttgttccaatacaaacatat 420
Query: 301 gatgattgadaaactgttgtkatttctcatttgtgttattgatacatagttgttcgaaag 360
||||||||| |||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 419 gatgattgaaaaactgttgtaatttctcatttgtgtaattgatacatagttgttcgaaag 360
Query: 361 aattatctttgaaaatttcgaacccagcgatatccaataatccaataaaatattcagtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 aattatctttgaaaatttcgaacccagcgatatccaataatccaataaaatattcagtca 300
Query: 421 tcgatccatgctctaaactcttgttaatttgatttacaatatattcgaraagcttctcat 480
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 299 tcgatccatgctctaaactcttgttaatttgatttacaatatattcgaaaagcttctcat 240
Query: 481 ataatgatcgggataaagagttaagaattgaccttgcctgtgaggcatttttggcttgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ataatgatcgggataaagagttaagaattgaccttgcctgtgaggcatttttggcttgtg 180
Query: 541 atacccattctttaccagcctttgatttaggttttagaacagctgacttgaaatcgtctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 atacccattctttaccagcctttgatttaggttttagaacagctgacttgaaatcgtctt 120
Query: 601 cctgaactcctagaagtttacacaagggtttgatatcatttttaatgctggcttgttctg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 cctgaactcctagaagtttacacaagggtttgatatcatttttaatgctggcttgttctg 60
Query: 661 acctctctgatacaaactcaacgttaccgatgtgcaatatgatagaaatac 711
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 acctctctgatacaaactcaacgttaccgatgtgcaatatgatagaaatac 9
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7804
Number of Sequences: 1807
Number of extensions: 7804
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 1
length of query: 880
length of database: 10,358,551
effective HSP length: 16
effective length of query: 864
effective length of database: 10,329,639
effective search space: 8924808096
effective search space used: 8924808096
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)